Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.49■□□□□ 0.87
ARFGEF1Q9Y6D6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 KRT8P44-201ENST00000441609 1350 ntBASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 MIR6787-201ENST00000616675 61 ntBASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 LYSMD4-203ENST00000378904 2122 ntBASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 AC092933.1-201ENST00000393644 945 ntBASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 AC133552.6-201ENST00000613406 534 ntBASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.48■□□□□ 0.87
ARFGEF1Q9Y6D6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 AC098850.1-201ENST00000419919 790 ntBASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 AC114501.2-201ENST00000439631 535 ntBASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 RN7SL618P-201ENST00000477850 296 ntBASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 RNA5SP410-201ENST00000516285 106 ntBASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ARFGEF1Q9Y6D6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AL355994.2-201ENST00000447882 704 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 ELK1P1-201ENST00000485699 580 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 TPRX2P-201ENST00000535362 881 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CYP2A7P1-201ENST00000595391 815 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 5S_rRNA.22-201ENST00000614916 106 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 LINC00896-202ENST00000609602 2128 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 DOC2GP-202ENST00000514950 1163 ntBASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.46■□□□□ 0.87
ARFGEF1Q9Y6D6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms