Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGC4Q9Y5F7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGC4Q9Y5F7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AC140113.2-201ENST00000604370 208 ntBASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGC4Q9Y5F7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 KRT18P2-201ENST00000447938 1258 ntBASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 HCG4B-203ENST00000450128 991 ntBASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 AL671883.3-201ENST00000603274 991 ntBASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 AC064836.3-201ENST00000607928 673 ntBASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGC4Q9Y5F7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 IGLL3P-201ENST00000412472 434 ntBASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 AC107918.2-201ENST00000530817 355 ntBASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 AC027601.4-201ENST00000611259 610 ntBASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 PCDHB17P-201ENST00000539533 2393 ntBASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGC4Q9Y5F7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms