Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 PKD1P1-201ENST00000458669 6805 ntBASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 FO538757.1-201ENST00000623083 1397 ntBASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 IGHV3-42-201ENST00000520410 361 ntBASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 MIR3909-201ENST00000579518 119 ntBASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 AC239800.4-201ENST00000603712 296 ntBASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB7Q9Y5E2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 AC131009.4-201ENST00000624048 1740 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 TREML5P-201ENST00000421694 576 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 ALG1L8P-201ENST00000533887 760 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 AC190387.1-201ENST00000551683 408 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 MPDU1-223ENST00000582151 728 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 MIR6080-201ENST00000617359 66 ntBASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB7Q9Y5E2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 AL021920.2-201ENST00000624828 1351 ntBASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 AP000842.3-202ENST00000569238 1080 ntBASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHB7Q9Y5E2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms