Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 AL596257.1-201ENST00000641463 2694 ntBASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 GUSBP12-201ENST00000513727 720 ntBASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 RNF126P1-202ENST00000569893 925 ntBASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2D4Q9Y2X8 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 YBX1P2-201ENST00000489612 999 ntBASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 VENTXP5-201ENST00000523979 775 ntBASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms