Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AC078925.2-201ENST00000624013 1973 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 RPS2P28-201ENST00000314255 741 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TPM4P1-201ENST00000436100 807 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AC087163.2-201ENST00000457299 853 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 MIR1199-201ENST00000621445 119 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AF228730.7-201ENST00000641842 219 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AP002414.3-201ENST00000589352 1468 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AGGF1P2-201ENST00000426656 2106 ntBASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP4E1Q9UPM8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MRPL3P1-201ENST00000400109 1033 ntBASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 AL356488.2-201ENST00000602755 427 ntBASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
AP4E1Q9UPM8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4E1Q9UPM8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
AP4E1Q9UPM8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.64■□□□□ 0.42
AP4E1Q9UPM8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4E1Q9UPM8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
AP4E1Q9UPM8 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.64■□□□□ 0.41
AP4E1Q9UPM8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms