Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC105233.2-201ENST00000523697 349 ntBASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AF228730.5-201ENST00000530288 346 ntBASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC069262.1-201ENST00000539058 672 ntBASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 AL133373.2-201ENST00000623187 2828 ntBASIC19.43■□□□□ 0.7
SYNPO2Q9UMS6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 SNX33P1-201ENST00000592116 1762 ntBASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 AC051619.7-201ENST00000568314 623 ntBASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 AC141586.5-201ENST00000624546 2050 ntBASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYNPO2Q9UMS6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 SPDYE14P-201ENST00000442619 822 ntBASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 FAM86GP-201ENST00000448322 971 ntBASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYNPO2Q9UMS6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms