Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 AK4P3-201ENST00000418260 669 ntBASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC124864.1-201ENST00000623408 392 ntBASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 CICP6-201ENST00000457191 2729 ntBASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 STK19B-204ENST00000512515 211 ntBASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL592071.1-201ENST00000611956 408 ntBASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPSNAP3AQ9UFN0 FRMD8P1-201ENST00000440433 1524 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 GPR89P-201ENST00000407924 1495 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC073508.3-201ENST00000619697 1419 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC011840.4-201ENST00000578471 627 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL138831.2-201ENST00000606564 490 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms