Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CXXC1Q9P0U4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.07■□□□□ 0.48
CXXC1Q9P0U4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 AL353705.2-201ENST00000428243 662 ntBASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 AC022210.1-201ENST00000449856 793 ntBASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CXXC1Q9P0U4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 KRT18P34-201ENST00000488218 1270 ntBASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 AC092658.1-201ENST00000505836 891 ntBASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 AC106886.1-201ENST00000568660 600 ntBASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 MIR4259-201ENST00000584466 101 ntBASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CXXC1Q9P0U4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SPDYE19P-201ENST00000338590 713 ntBASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AC087499.6-201ENST00000411576 835 ntBASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AC021097.1-201ENST00000607902 574 ntBASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 AL391825.1-201ENST00000457671 1364 ntBASIC18.04■□□□□ 0.48
CXXC1Q9P0U4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CXXC1Q9P0U4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CXXC1Q9P0U4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CXXC1Q9P0U4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CXXC1Q9P0U4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms