Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HACD3Q9P035 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HACD3Q9P035 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.25■□□□□ 0.35
HACD3Q9P035 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HACD3Q9P035 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.25■□□□□ 0.35
HACD3Q9P035 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HACD3Q9P035 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
HACD3Q9P035 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.24■□□□□ 0.35
HACD3Q9P035 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 RPS2P28-201ENST00000314255 741 ntBASIC17.24■□□□□ 0.35
HACD3Q9P035 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 AC079781.3-201ENST00000449110 356 ntBASIC17.24■□□□□ 0.35
HACD3Q9P035 AC018712.1-201ENST00000455767 687 ntBASIC17.24■□□□□ 0.35
HACD3Q9P035 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 TNRC18P3-201ENST00000441896 2691 ntBASIC17.24■□□□□ 0.35
HACD3Q9P035 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.24■□□□□ 0.35
HACD3Q9P035 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HACD3Q9P035 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HACD3Q9P035 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.23■□□□□ 0.35
HACD3Q9P035 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.23■□□□□ 0.35
HACD3Q9P035 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HACD3Q9P035 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.23■□□□□ 0.35
HACD3Q9P035 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.23■□□□□ 0.35
HACD3Q9P035 AL160237.2-201ENST00000556165 472 ntBASIC17.23■□□□□ 0.35
HACD3Q9P035 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.23■□□□□ 0.35
HACD3Q9P035 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.23■□□□□ 0.35
HACD3Q9P035 AL031008.1-201ENST00000619963 541 ntBASIC17.23■□□□□ 0.35
HACD3Q9P035 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.23■□□□□ 0.35
HACD3Q9P035 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HACD3Q9P035 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HACD3Q9P035 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
HACD3Q9P035 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HACD3Q9P035 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.22■□□□□ 0.35
HACD3Q9P035 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HACD3Q9P035 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms