Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC2Q9H467 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC2Q9H467 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CUEDC2Q9H467 HLA-A-202ENST00000376806 1854 ntBASIC18.97■□□□□ 0.63
CUEDC2Q9H467 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CUEDC2Q9H467 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.97■□□□□ 0.63
CUEDC2Q9H467 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 AL603756.1-201ENST00000606511 2163 ntBASIC18.96■□□□□ 0.63
CUEDC2Q9H467 AC002310.6-201ENST00000624451 1377 ntBASIC18.96■□□□□ 0.63
CUEDC2Q9H467 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 AC124067.4-201ENST00000519691 2379 ntBASIC18.96■□□□□ 0.63
CUEDC2Q9H467 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 OR7E14P-202ENST00000530490 1290 ntBASIC18.96■□□□□ 0.63
CUEDC2Q9H467 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 PI4KAP1-204ENST00000612579 1703 ntBASIC18.96■□□□□ 0.63
CUEDC2Q9H467 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CUEDC2Q9H467 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 AC073621.1-201ENST00000392730 636 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 DUSP5P1-201ENST00000441325 1139 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 RNPS1P1-201ENST00000507437 918 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 AL121912.1-201ENST00000603683 238 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 GGTLC5P-201ENST00000617623 998 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 REXO1L3P-201ENST00000622202 1288 ntBASIC18.95■□□□□ 0.62
CUEDC2Q9H467 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CUEDC2Q9H467 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 AC006538.1-201ENST00000567905 1585 ntBASIC18.94■□□□□ 0.62
CUEDC2Q9H467 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 RPS2P1-201ENST00000434010 821 ntBASIC18.94■□□□□ 0.62
CUEDC2Q9H467 RPS15P9-201ENST00000494093 319 ntBASIC18.94■□□□□ 0.62
CUEDC2Q9H467 AC136632.2-201ENST00000512891 861 ntBASIC18.94■□□□□ 0.62
CUEDC2Q9H467 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.94■□□□□ 0.62
CUEDC2Q9H467 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms