Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN3Q9H347 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC105020.1-201ENST00000435356 2205 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC073621.1-201ENST00000392730 636 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SLC25A1P3-201ENST00000395415 828 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC004706.3-202ENST00000621574 984 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 AC005915.1-201ENST00000624912 2018 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 UBALD1-205ENST00000590891 2641 ntBASIC15.8■□□□□ 0.12
UBQLN3Q9H347 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN3Q9H347 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 PCDHA14-201ENST00000506751 2298 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AP002414.3-201ENST00000589352 1468 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AC098831.1-202ENST00000438821 336 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AC092910.1-201ENST00000482027 1129 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AC145285.3-201ENST00000564603 959 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 AC093525.9-201ENST00000624961 1746 ntBASIC15.79■□□□□ 0.12
UBQLN3Q9H347 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN3Q9H347 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms