Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MMP28Q9H239 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP28Q9H239 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.09■□□□□ 0.01
MMP28Q9H239 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
MMP28Q9H239 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
MMP28Q9H239 AC104076.2-201ENST00000448912 469 ntBASIC15.09■□□□□ 0.01
MMP28Q9H239 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 DUX4L26-201ENST00000489078 1255 ntBASIC15.09■□□□□ 0.01
MMP28Q9H239 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP28Q9H239 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP28Q9H239 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.09■□□□□ 0.01
MMP28Q9H239 NTF6B-201ENST00000591913 560 ntBASIC15.09■□□□□ 0.01
MMP28Q9H239 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP28Q9H239 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MMP28Q9H239 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
MMP28Q9H239 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
MMP28Q9H239 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
MMP28Q9H239 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP28Q9H239 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.09■□□□□ 0.01
MMP28Q9H239 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
MMP28Q9H239 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.09■□□□□ 0.01
MMP28Q9H239 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.08■□□□□ 0.01
MMP28Q9H239 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
MMP28Q9H239 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
MMP28Q9H239 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
MMP28Q9H239 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
MMP28Q9H239 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.08■□□□□ 0
MMP28Q9H239 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 AC009065.1-201ENST00000564055 1225 ntBASIC15.08■□□□□ 0
MMP28Q9H239 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.08■□□□□ 0
MMP28Q9H239 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.08■□□□□ 0
MMP28Q9H239 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.08■□□□□ 0
MMP28Q9H239 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
MMP28Q9H239 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 AC132938.6-201ENST00000623828 1655 ntBASIC15.07■□□□□ 0
MMP28Q9H239 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
MMP28Q9H239 LINC02012-201ENST00000608206 1725 ntBASIC15.07■□□□□ 0
MMP28Q9H239 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.07■□□□□ 0
MMP28Q9H239 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.07■□□□□ 0
MMP28Q9H239 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms