Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 RNF152P1-201ENST00000397754 604 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 TSPY5P-201ENST00000426936 936 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 AC092647.4-201ENST00000457211 535 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 RNF126P1-202ENST00000569893 925 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 TUBB8P12-201ENST00000308911 1335 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 TUBB7P-202ENST00000428444 1305 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 TUBB8P7-204ENST00000567960 1332 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 KRT8P10-201ENST00000450021 1447 ntBASIC15.08■□□□□ 0
COMMD4Q9H0A8 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
COMMD4Q9H0A8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.08■□□□□ 0
COMMD4Q9H0A8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.07■□□□□ 0
COMMD4Q9H0A8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 AL135999.2-201ENST00000622438 1686 ntBASIC15.07■□□□□ 0
COMMD4Q9H0A8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 LINC01023-201ENST00000606054 436 ntBASIC15.07■□□□□ 0
COMMD4Q9H0A8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COMMD4Q9H0A8 AC009336.1-201ENST00000608941 1553 ntBASIC15.07■□□□□ 0
COMMD4Q9H0A8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.07■□□□□ 0
COMMD4Q9H0A8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 AC007326.2-201ENST00000624224 7579 ntBASIC15.06■□□□□ 0
COMMD4Q9H0A8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 KRT18P38-201ENST00000449496 1282 ntBASIC15.06■□□□□ 0
COMMD4Q9H0A8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COMMD4Q9H0A8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.06■□□□□ 0
COMMD4Q9H0A8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms