Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 HLA-A-202ENST00000376806 1854 ntBASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCSER1Q9C0I3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 MIR4492-201ENST00000581627 80 ntBASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 MIR1199-201ENST00000621445 119 ntBASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 AL118508.1-201ENST00000613502 2345 ntBASIC19.02■□□□□ 0.64
CCSER1Q9C0I3 AP002414.3-201ENST00000589352 1468 ntBASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.02■□□□□ 0.63
CCSER1Q9C0I3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 FDX1P1-201ENST00000449115 551 ntBASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCSER1Q9C0I3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCSER1Q9C0I3 AC092171.3-201ENST00000610122 2651 ntBASIC19■□□□□ 0.63
CCSER1Q9C0I3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCSER1Q9C0I3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCSER1Q9C0I3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 HLA-J-202ENST00000469281 1241 ntBASIC19■□□□□ 0.63
CCSER1Q9C0I3 AC107918.2-201ENST00000530817 355 ntBASIC19■□□□□ 0.63
CCSER1Q9C0I3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 MPDU1-223ENST00000582151 728 ntBASIC19■□□□□ 0.63
CCSER1Q9C0I3 AL773604.1-201ENST00000617417 272 ntBASIC19■□□□□ 0.63
CCSER1Q9C0I3 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19■□□□□ 0.63
CCSER1Q9C0I3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCSER1Q9C0I3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCSER1Q9C0I3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 RNA5SP419-201ENST00000515908 135 ntBASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCSER1Q9C0I3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms