Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FOXP3Q9BZS1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 FAM220CP-201ENST00000395253 831 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 AC011840.4-201ENST00000578471 627 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 TUBB8P12-201ENST00000308911 1335 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 TUBB7P-202ENST00000428444 1305 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 TUBB8P7-204ENST00000567960 1332 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 AL513523.2-202ENST00000427283 2040 ntBASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FOXP3Q9BZS1 AL391005.1-201ENST00000623953 2435 ntBASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 AKR1C7P-201ENST00000305623 895 ntBASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
FOXP3Q9BZS1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 AL353593.2-201ENST00000602529 1483 ntBASIC17.58■□□□□ 0.41
FOXP3Q9BZS1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AC106795.1-205ENST00000512851 1056 ntBASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AL138831.2-201ENST00000606564 490 ntBASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 PCDH8P1-201ENST00000428983 2773 ntBASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AL135999.2-201ENST00000622438 1686 ntBASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
FOXP3Q9BZS1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.57■□□□□ 0.4
FOXP3Q9BZS1 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms