Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11YQ9BZA8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 AL035456.1-201ENST00000456064 1369 ntBASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11YQ9BZA8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 AL138688.1-201ENST00000624851 1594 ntBASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH11YQ9BZA8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 NME2P1-201ENST00000426182 414 ntBASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 AL353705.2-201ENST00000428243 662 ntBASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 MEIS3P1-201ENST00000495167 958 ntBASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 AC108860.2-201ENST00000562760 2183 ntBASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11YQ9BZA8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FAM220BP-201ENST00000377689 816 ntBASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11YQ9BZA8 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11YQ9BZA8 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms