Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDH11XQ9BZA7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 AL035456.1-201ENST00000456064 1369 ntBASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDH11XQ9BZA7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 AL138688.1-201ENST00000624851 1594 ntBASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDH11XQ9BZA7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 NME2P1-201ENST00000426182 414 ntBASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 AL353705.2-201ENST00000428243 662 ntBASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 MEIS3P1-201ENST00000495167 958 ntBASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 AC108860.2-201ENST00000562760 2183 ntBASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDH11XQ9BZA7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FAM220BP-201ENST00000377689 816 ntBASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.81■■□□□ 1.08
PCDH11XQ9BZA7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDH11XQ9BZA7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms