Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DBET-201ENST00000630918 3363 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC046185.3-201ENST00000623228 1824 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MIR663A-201ENST00000385250 93 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 KRT17P3-201ENST00000420566 1262 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AL355355.2-201ENST00000442321 338 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC026185.1-201ENST00000445748 174 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AL353708.3-201ENST00000610272 989 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC080038.1-201ENST00000611274 1154 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AP002414.2-201ENST00000591780 3365 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 KRT8P9-201ENST00000558927 1449 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 AC024909.3-201ENST00000611513 2257 ntBASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LCE3DQ9BYE3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms