Protein–RNA interactions for Protein: Q99848

EBNA1BP2, Probable rRNA-processing protein EBP2, humanhuman

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBNA1BP2Q99848 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBNA1BP2Q99848 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
EBNA1BP2Q99848 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
EBNA1BP2Q99848 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
EBNA1BP2Q99848 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBNA1BP2Q99848 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBNA1BP2Q99848 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.34
EBNA1BP2Q99848 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
EBNA1BP2Q99848 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 AC099336.1-202ENST00000602961 463 ntBASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
EBNA1BP2Q99848 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 LINC00895-201ENST00000629028 1637 ntBASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 CYP2T1P-202ENST00000641596 2535 ntBASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 AL662844.4-201ENST00000606367 2838 ntBASIC17.19■□□□□ 0.34
EBNA1BP2Q99848 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 AC026691.1-201ENST00000602502 2017 ntBASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EBNA1BP2Q99848 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EBNA1BP2Q99848 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
EBNA1BP2Q99848 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
EBNA1BP2Q99848 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
EBNA1BP2Q99848 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms