Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 AL451050.2-201ENST00000606967 682 ntBASIC5.08□□□□□ -1.6
HMCN1Q96RW7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 AC244669.2-201ENST00000612320 853 ntBASIC5.08□□□□□ -1.6
HMCN1Q96RW7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMCN1Q96RW7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 EEF1DP6-201ENST00000449232 372 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 NUP210P1-202ENST00000504322 710 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL645939.5-201ENST00000606834 243 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL353732.1-201ENST00000569618 1459 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 CD8B2-202ENST00000417670 633 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ENPP7P5-201ENST00000541031 1031 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 DEK-201ENST00000244776 1441 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL355864.2-201ENST00000447420 863 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 FGFR3P1-201ENST00000449999 601 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL512361.1-201ENST00000554200 418 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 RN7SL574P-201ENST00000581512 297 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC005702.4-201ENST00000618393 416 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AL033527.5-202ENST00000641632 1098 ntBASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 MGST3-203ENST00000367885 680 ntTSL 2 BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMCN1Q96RW7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms