Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.3■□□□□ 0.84
TNPO1Q92973 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.3■□□□□ 0.84
TNPO1Q92973 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.3■□□□□ 0.84
TNPO1Q92973 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.3■□□□□ 0.84
TNPO1Q92973 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TNPO1Q92973 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 AC004263.2-201ENST00000617183 678 ntBASIC20.3■□□□□ 0.84
TNPO1Q92973 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.3■□□□□ 0.84
TNPO1Q92973 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.3■□□□□ 0.84
TNPO1Q92973 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TNPO1Q92973 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TNPO1Q92973 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 AC105917.1-201ENST00000506637 2539 ntBASIC20.29■□□□□ 0.84
TNPO1Q92973 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TNPO1Q92973 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.29■□□□□ 0.84
TNPO1Q92973 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.29■□□□□ 0.84
TNPO1Q92973 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNPO1Q92973 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TNPO1Q92973 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TNPO1Q92973 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TNPO1Q92973 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.29■□□□□ 0.84
TNPO1Q92973 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.29■□□□□ 0.84
TNPO1Q92973 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNPO1Q92973 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TNPO1Q92973 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.28■□□□□ 0.84
TNPO1Q92973 AC024909.3-201ENST00000611513 2257 ntBASIC20.28■□□□□ 0.84
TNPO1Q92973 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 POM121L3P-201ENST00000419331 1163 ntBASIC20.28■□□□□ 0.84
TNPO1Q92973 FOSL1P1-201ENST00000511041 816 ntBASIC20.28■□□□□ 0.84
TNPO1Q92973 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.28■□□□□ 0.84
TNPO1Q92973 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TNPO1Q92973 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.28■□□□□ 0.84
TNPO1Q92973 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.28■□□□□ 0.84
TNPO1Q92973 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNPO1Q92973 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.27■□□□□ 0.84
TNPO1Q92973 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.27■□□□□ 0.84
TNPO1Q92973 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.27■□□□□ 0.84
TNPO1Q92973 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.27■□□□□ 0.84
TNPO1Q92973 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 TSPY12P-201ENST00000421279 868 ntBASIC20.27■□□□□ 0.84
TNPO1Q92973 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 KRT18P31-201ENST00000506277 1292 ntBASIC20.27■□□□□ 0.84
TNPO1Q92973 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.27■□□□□ 0.84
TNPO1Q92973 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TNPO1Q92973 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TNPO1Q92973 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNPO1Q92973 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms