Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 IGHV3-52-201ENST00000519770 353 ntBASIC16.12■□□□□ 0.17
TM9SF4Q92544 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 AL138688.1-201ENST00000624851 1594 ntBASIC16.12■□□□□ 0.17
TM9SF4Q92544 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TM9SF4Q92544 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.12■□□□□ 0.17
TM9SF4Q92544 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 MCCD1P2-201ENST00000423228 335 ntBASIC16.11■□□□□ 0.17
TM9SF4Q92544 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TM9SF4Q92544 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TM9SF4Q92544 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.1■□□□□ 0.17
TM9SF4Q92544 BX276092.7-203ENST00000637198 1536 ntBASIC16.1■□□□□ 0.17
TM9SF4Q92544 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 AL139384.1-201ENST00000612143 3047 ntBASIC16.1■□□□□ 0.17
TM9SF4Q92544 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 PRSS29P-201ENST00000440800 595 ntBASIC16.1■□□□□ 0.17
TM9SF4Q92544 AC005829.1-201ENST00000570002 483 ntBASIC16.1■□□□□ 0.17
TM9SF4Q92544 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.1■□□□□ 0.17
TM9SF4Q92544 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TM9SF4Q92544 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TM9SF4Q92544 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF4Q92544 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 AC133963.1-201ENST00000504166 1679 ntBASIC16.09■□□□□ 0.17
TM9SF4Q92544 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.09■□□□□ 0.17
TM9SF4Q92544 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TM9SF4Q92544 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TM9SF4Q92544 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms