Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 AL512356.2-201ENST00000546955 174 ntBASIC17.02■□□□□ 0.32
HMGB4Q8WW32 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HMGB4Q8WW32 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 LTB4R2-202ENST00000528054 3092 ntBASIC17.02■□□□□ 0.31
HMGB4Q8WW32 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
HMGB4Q8WW32 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HMGB4Q8WW32 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 AL353732.1-201ENST00000569618 1459 ntBASIC17■□□□□ 0.31
HMGB4Q8WW32 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17■□□□□ 0.31
HMGB4Q8WW32 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17■□□□□ 0.31
HMGB4Q8WW32 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HMGB4Q8WW32 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
HMGB4Q8WW32 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HMGB4Q8WW32 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGB4Q8WW32 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGB4Q8WW32 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGB4Q8WW32 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGB4Q8WW32 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms