Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 AC093525.9-201ENST00000624961 1746 ntBASIC16.61■□□□□ 0.25
HIPK4Q8NE63 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.61■□□□□ 0.25
HIPK4Q8NE63 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.6■□□□□ 0.25
HIPK4Q8NE63 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 AC144831.1-201ENST00000573312 2656 ntBASIC16.59■□□□□ 0.25
HIPK4Q8NE63 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 AC093827.2-201ENST00000512654 315 ntBASIC16.59■□□□□ 0.25
HIPK4Q8NE63 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIPK4Q8NE63 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HIPK4Q8NE63 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HIPK4Q8NE63 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms