Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 RNA5SP419-201ENST00000515908 135 ntBASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RAB42Q8N4Z0 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 AL590627.1-203ENST00000421194 1026 ntBASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 PAWRP1-201ENST00000451083 565 ntBASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 AC108751.1-201ENST00000490852 363 ntBASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 MIR4751-201ENST00000578027 74 ntBASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 AC026471.1-201ENST00000564629 3026 ntBASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RAB42Q8N4Z0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 AC108860.2-201ENST00000562760 2183 ntBASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 ZNF259P1-201ENST00000407656 1365 ntBASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.55■□□□□ 0.24
RAB42Q8N4Z0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms