Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SCML4Q8N228 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SCML4Q8N228 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.62■□□□□ 0.41
SCML4Q8N228 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
SCML4Q8N228 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.61■□□□□ 0.41
SCML4Q8N228 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.61■□□□□ 0.41
SCML4Q8N228 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.61■□□□□ 0.41
SCML4Q8N228 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.61■□□□□ 0.41
SCML4Q8N228 AP002472.1-201ENST00000577490 586 ntBASIC17.61■□□□□ 0.41
SCML4Q8N228 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.61■□□□□ 0.41
SCML4Q8N228 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.61■□□□□ 0.41
SCML4Q8N228 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SCML4Q8N228 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
SCML4Q8N228 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SCML4Q8N228 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.61■□□□□ 0.41
SCML4Q8N228 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SCML4Q8N228 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 RNU1-129P-201ENST00000384064 167 ntBASIC17.6■□□□□ 0.41
SCML4Q8N228 MKNK2P1-201ENST00000437526 628 ntBASIC17.6■□□□□ 0.41
SCML4Q8N228 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.6■□□□□ 0.41
SCML4Q8N228 U1.21-201ENST00000580816 167 ntBASIC17.6■□□□□ 0.41
SCML4Q8N228 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 C20orf181-201ENST00000623918 480 ntBASIC17.6■□□□□ 0.41
SCML4Q8N228 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 AC105020.1-201ENST00000435356 2205 ntBASIC17.6■□□□□ 0.41
SCML4Q8N228 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SCML4Q8N228 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.6■□□□□ 0.41
SCML4Q8N228 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.6■□□□□ 0.41
SCML4Q8N228 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SCML4Q8N228 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SCML4Q8N228 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 AL645728.1-201ENST00000366221 2101 ntBASIC17.59■□□□□ 0.41
SCML4Q8N228 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.59■□□□□ 0.41
SCML4Q8N228 AL391256.1-201ENST00000443260 1855 ntBASIC17.59■□□□□ 0.41
SCML4Q8N228 SNX33P1-201ENST00000592116 1762 ntBASIC17.59■□□□□ 0.41
SCML4Q8N228 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SCML4Q8N228 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SCML4Q8N228 PMS2P4-201ENST00000412466 1052 ntBASIC17.59■□□□□ 0.41
SCML4Q8N228 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.59■□□□□ 0.41
SCML4Q8N228 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.59■□□□□ 0.41
SCML4Q8N228 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
SCML4Q8N228 AC023511.2-201ENST00000618803 211 ntBASIC17.59■□□□□ 0.41
SCML4Q8N228 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.59■□□□□ 0.41
SCML4Q8N228 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SCML4Q8N228 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SCML4Q8N228 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms