Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
LINC00346Q8IVM7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 TNRC18P3-201ENST00000441896 2691 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AC132008.2-207ENST00000454517 770 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AP001269.4-201ENST00000609611 512 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AL732292.2-201ENST00000609649 430 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 PCDHB17P-201ENST00000539533 2393 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 AC079776.2-201ENST00000641154 1609 ntBASIC15.1■□□□□ 0.01
LINC00346Q8IVM7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 LINC00982-205ENST00000420957 435 ntBASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 ACTG1P4-201ENST00000425123 1122 ntBASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 KRT16P4-201ENST00000453883 522 ntBASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 BX005266.1-201ENST00000473402 457 ntBASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 SIGLEC16-201ENST00000599858 1437 ntBASIC15.09■□□□□ 0.01
LINC00346Q8IVM7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LINC00346Q8IVM7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.08■□□□□ 0
LINC00346Q8IVM7 HCG4P8-203ENST00000443049 980 ntBASIC15.08■□□□□ 0
LINC00346Q8IVM7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LINC00346Q8IVM7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms