Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 AC096733.2-201ENST00000609937 1394 ntBASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CROCCP3Q8IVE0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AC026271.2-201ENST00000428091 497 ntBASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AC133681.1-201ENST00000465482 601 ntBASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 B3GAT3P1-201ENST00000471720 806 ntBASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AC008403.3-201ENST00000598924 454 ntBASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CROCCP3Q8IVE0 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 FSCN1P1-201ENST00000568912 1481 ntBASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 MIR5787-201ENST00000611784 55 ntBASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 CR392000.1-201ENST00000624770 1228 ntBASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CROCCP3Q8IVE0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms