Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRRC28Q86X40 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.21■□□□□ 0.02
LRRC28Q86X40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRRC28Q86X40 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 AC132872.4-202ENST00000622924 2756 ntBASIC15.2■□□□□ 0.02
LRRC28Q86X40 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 DRAXINP1-201ENST00000437611 948 ntBASIC15.2■□□□□ 0.02
LRRC28Q86X40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC28Q86X40 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LRRC28Q86X40 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 AC092053.1-201ENST00000605787 1936 ntBASIC15.19■□□□□ 0.02
LRRC28Q86X40 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 RN7SL606P-201ENST00000472779 293 ntBASIC15.19■□□□□ 0.02
LRRC28Q86X40 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC28Q86X40 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC28Q86X40 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms