Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 AC073439.1-201ENST00000624121 1774 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
USP50Q70EL3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
USP50Q70EL3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USP50Q70EL3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 RNA5SP410-201ENST00000516285 106 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.81■□□□□ 0.76
USP50Q70EL3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP50Q70EL3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.81■□□□□ 0.76
USP50Q70EL3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 SRD5A3P1-201ENST00000603021 949 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.81■□□□□ 0.76
USP50Q70EL3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 KRT8P49-201ENST00000604166 1432 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.81■□□□□ 0.76
USP50Q70EL3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP50Q70EL3 AC138028.4-201ENST00000564984 1845 ntBASIC19.81■□□□□ 0.76
USP50Q70EL3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.81■□□□□ 0.76
USP50Q70EL3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.8■□□□□ 0.76
USP50Q70EL3 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.8■□□□□ 0.76
USP50Q70EL3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.8■□□□□ 0.76
USP50Q70EL3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.8■□□□□ 0.76
USP50Q70EL3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 AC007389.4-201ENST00000454674 793 ntBASIC19.8■□□□□ 0.76
USP50Q70EL3 ELK1P1-201ENST00000485699 580 ntBASIC19.8■□□□□ 0.76
USP50Q70EL3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.8■□□□□ 0.76
USP50Q70EL3 CTBP2P3-201ENST00000585629 1255 ntBASIC19.8■□□□□ 0.76
USP50Q70EL3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
USP50Q70EL3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP50Q70EL3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.79■□□□□ 0.76
USP50Q70EL3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP50Q70EL3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP50Q70EL3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.79■□□□□ 0.76
USP50Q70EL3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 TMEM14DP-201ENST00000422205 345 ntBASIC19.79■□□□□ 0.76
USP50Q70EL3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.79■□□□□ 0.76
USP50Q70EL3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.79■□□□□ 0.76
USP50Q70EL3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.79■□□□□ 0.76
USP50Q70EL3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
USP50Q70EL3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP50Q70EL3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP50Q70EL3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
USP50Q70EL3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP50Q70EL3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.78■□□□□ 0.76
USP50Q70EL3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP50Q70EL3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP50Q70EL3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
USP50Q70EL3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.78■□□□□ 0.76
USP50Q70EL3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP50Q70EL3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms