Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AL021920.2-201ENST00000624828 1351 ntBASIC15.89■□□□□ 0.13
REEP3Q6NUK4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AC104819.1-201ENST00000504587 486 ntBASIC15.89■□□□□ 0.13
REEP3Q6NUK4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AC092329.2-201ENST00000598402 547 ntBASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AC006449.5-201ENST00000610658 2098 ntBASIC15.89■□□□□ 0.13
REEP3Q6NUK4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
REEP3Q6NUK4 AL391256.1-201ENST00000443260 1855 ntBASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC087388.1-201ENST00000571370 1112 ntBASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC079328.2-201ENST00000561241 3354 ntBASIC15.88■□□□□ 0.13
REEP3Q6NUK4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 AC004817.3-201ENST00000602957 2129 ntBASIC15.88■□□□□ 0.13
REEP3Q6NUK4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
REEP3Q6NUK4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 ABCD1P5-201ENST00000445663 754 ntBASIC15.87■□□□□ 0.13
REEP3Q6NUK4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 AC012615.1-201ENST00000565797 1299 ntBASIC15.87■□□□□ 0.13
REEP3Q6NUK4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 AL590326.2-201ENST00000625139 305 ntBASIC15.87■□□□□ 0.13
REEP3Q6NUK4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.87■□□□□ 0.13
REEP3Q6NUK4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms