Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.44■□□□□ 0.7
HTRA3P83110 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 PKD1P6-201ENST00000343738 4769 ntBASIC19.44■□□□□ 0.7
HTRA3P83110 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.44■□□□□ 0.7
HTRA3P83110 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.44■□□□□ 0.7
HTRA3P83110 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 AKR7A2P1-201ENST00000460134 915 ntBASIC19.44■□□□□ 0.7
HTRA3P83110 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HTRA3P83110 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HTRA3P83110 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
HTRA3P83110 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.44■□□□□ 0.7
HTRA3P83110 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HTRA3P83110 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HTRA3P83110 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.44■□□□□ 0.7
HTRA3P83110 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.43■□□□□ 0.7
HTRA3P83110 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.43■□□□□ 0.7
HTRA3P83110 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.43■□□□□ 0.7
HTRA3P83110 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.43■□□□□ 0.7
HTRA3P83110 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.43■□□□□ 0.7
HTRA3P83110 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.43■□□□□ 0.7
HTRA3P83110 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 AC026954.1-201ENST00000429771 1293 ntBASIC19.43■□□□□ 0.7
HTRA3P83110 FNTAP2-201ENST00000430308 634 ntBASIC19.43■□□□□ 0.7
HTRA3P83110 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.43■□□□□ 0.7
HTRA3P83110 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.43■□□□□ 0.7
HTRA3P83110 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HTRA3P83110 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC19.43■□□□□ 0.7
HTRA3P83110 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA3P83110 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HTRA3P83110 AL607033.1-201ENST00000623900 1599 ntBASIC19.42■□□□□ 0.7
HTRA3P83110 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.42■□□□□ 0.7
HTRA3P83110 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.42■□□□□ 0.7
HTRA3P83110 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.42■□□□□ 0.7
HTRA3P83110 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 CHMP4BP1-201ENST00000556017 588 ntBASIC19.42■□□□□ 0.7
HTRA3P83110 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA3P83110 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
HTRA3P83110 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC19.42■□□□□ 0.7
HTRA3P83110 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.42■□□□□ 0.7
HTRA3P83110 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HTRA3P83110 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.42■□□□□ 0.7
HTRA3P83110 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
HTRA3P83110 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HTRA3P83110 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.41■□□□□ 0.7
HTRA3P83110 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HTRA3P83110 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HTRA3P83110 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HTRA3P83110 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.41■□□□□ 0.7
HTRA3P83110 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC19.41■□□□□ 0.7
HTRA3P83110 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.41■□□□□ 0.7
HTRA3P83110 FAM86HP-204ENST00000513466 959 ntBASIC19.41■□□□□ 0.7
HTRA3P83110 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.41■□□□□ 0.7
HTRA3P83110 AP000812.2-201ENST00000538934 718 ntBASIC19.41■□□□□ 0.7
HTRA3P83110 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.41■□□□□ 0.7
HTRA3P83110 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HTRA3P83110 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms