Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.06■□□□□ 0
NKX6-1P78426 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
NKX6-1P78426 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NKX6-1P78426 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-1P78426 AC046158.3-201ENST00000624947 2558 ntBASIC15.06■□□□□ 0
NKX6-1P78426 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NKX6-1P78426 AC148477.5-201ENST00000625164 1645 ntBASIC15.06■□□□□ 0
NKX6-1P78426 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.06■□□□□ 0
NKX6-1P78426 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.06■□□□□ 0
NKX6-1P78426 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.06■□□□□ 0
NKX6-1P78426 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
NKX6-1P78426 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
NKX6-1P78426 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NKX6-1P78426 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.05■□□□□ 0
NKX6-1P78426 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.05■□□□□ -0
NKX6-1P78426 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 MCCD1P2-201ENST00000423228 335 ntBASIC15.05■□□□□ -0
NKX6-1P78426 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.05■□□□□ -0
NKX6-1P78426 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.05■□□□□ -0
NKX6-1P78426 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.05■□□□□ -0
NKX6-1P78426 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 CYMP-203ENST00000474680 1263 ntBASIC15.05■□□□□ -0
NKX6-1P78426 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.05■□□□□ -0
NKX6-1P78426 AC108751.1-201ENST00000490852 363 ntBASIC15.05■□□□□ -0
NKX6-1P78426 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-1P78426 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.05■□□□□ -0
NKX6-1P78426 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.05■□□□□ -0
NKX6-1P78426 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 AC009336.1-201ENST00000608941 1553 ntBASIC15.05■□□□□ -0
NKX6-1P78426 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
NKX6-1P78426 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NKX6-1P78426 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-1P78426 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.05■□□□□ -0
NKX6-1P78426 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NKX6-1P78426 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 PCDHA12-202ENST00000613593 2588 ntBASIC15.04■□□□□ -0
NKX6-1P78426 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 AC004817.3-201ENST00000602957 2129 ntBASIC15.04■□□□□ -0
NKX6-1P78426 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.04■□□□□ -0
NKX6-1P78426 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.04■□□□□ -0
NKX6-1P78426 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.04■□□□□ -0
NKX6-1P78426 SIGLEC30P-201ENST00000455569 941 ntBASIC15.04■□□□□ -0
NKX6-1P78426 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.04■□□□□ -0
NKX6-1P78426 STK19B-204ENST00000512515 211 ntBASIC15.04■□□□□ -0
NKX6-1P78426 RFPL4AP1-201ENST00000530883 850 ntBASIC15.04■□□□□ -0
NKX6-1P78426 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
NKX6-1P78426 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.04■□□□□ -0
NKX6-1P78426 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms