Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.04■□□□□ 0.16
TUBA4AP68366 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TUBA4AP68366 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TUBA4AP68366 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TUBA4AP68366 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TUBA4AP68366 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBA4AP68366 AC009065.1-201ENST00000564055 1225 ntBASIC16.03■□□□□ 0.16
TUBA4AP68366 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 MIR3180-4-201ENST00000582223 153 ntBASIC16.03■□□□□ 0.16
TUBA4AP68366 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.03■□□□□ 0.16
TUBA4AP68366 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.03■□□□□ 0.16
TUBA4AP68366 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TUBA4AP68366 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TUBA4AP68366 AC092053.1-201ENST00000605787 1936 ntBASIC16.03■□□□□ 0.16
TUBA4AP68366 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
TUBA4AP68366 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TUBA4AP68366 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TUBA4AP68366 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.02■□□□□ 0.16
TUBA4AP68366 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
TUBA4AP68366 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 AC079328.2-201ENST00000561241 3354 ntBASIC16.02■□□□□ 0.16
TUBA4AP68366 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TUBA4AP68366 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 PVRIG2P-201ENST00000435460 978 ntBASIC16.02■□□□□ 0.16
TUBA4AP68366 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBA4AP68366 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.02■□□□□ 0.16
TUBA4AP68366 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.02■□□□□ 0.16
TUBA4AP68366 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
TUBA4AP68366 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TUBA4AP68366 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA4AP68366 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA4AP68366 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.02■□□□□ 0.15
TUBA4AP68366 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA4AP68366 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TUBA4AP68366 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.02■□□□□ 0.15
TUBA4AP68366 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBA4AP68366 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA4AP68366 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA4AP68366 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.01■□□□□ 0.15
TUBA4AP68366 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBA4AP68366 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TUBA4AP68366 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.01■□□□□ 0.15
TUBA4AP68366 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 MTHFR-217ENST00000641820 1569 ntBASIC16.01■□□□□ 0.15
TUBA4AP68366 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TUBA4AP68366 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TUBA4AP68366 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms