Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 AL353593.2-201ENST00000602529 1483 ntBASIC12.17□□□□□ -0.46
UBE2D3P61077 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 GUK1-204ENST00000366721 689 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.17□□□□□ -0.46
UBE2D3P61077 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 AL121956.5-201ENST00000625261 221 ntBASIC12.17□□□□□ -0.46
UBE2D3P61077 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2D3P61077 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.17□□□□□ -0.46
UBE2D3P61077 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
UBE2D3P61077 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.17□□□□□ -0.46
UBE2D3P61077 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
UBE2D3P61077 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 FUT8-AS1-201ENST00000621019 1521 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 AC005915.1-201ENST00000624912 2018 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 LINC02228-204ENST00000642115 2962 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 AC092053.1-201ENST00000605787 1936 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CHCHD2P8-201ENST00000429873 447 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 BX276092.5-203ENST00000456199 560 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
UBE2D3P61077 AL121672.3-201ENST00000608644 468 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 EGFEM1P-202ENST00000431685 1563 ntBASIC12.16□□□□□ -0.46
UBE2D3P61077 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.16□□□□□ -0.46
UBE2D3P61077 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
UBE2D3P61077 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
UBE2D3P61077 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms