Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDC42P60953 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDC42P60953 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDC42P60953 FRMD8P1-201ENST00000440433 1524 ntBASIC15.63■□□□□ 0.09
CDC42P60953 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC42P60953 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.63■□□□□ 0.09
CDC42P60953 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.62■□□□□ 0.09
CDC42P60953 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CDC42P60953 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CDC42P60953 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.62■□□□□ 0.09
CDC42P60953 ZNF444P1-201ENST00000559497 298 ntBASIC15.62■□□□□ 0.09
CDC42P60953 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 GPR89P-201ENST00000407924 1495 ntBASIC15.62■□□□□ 0.09
CDC42P60953 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.62■□□□□ 0.09
CDC42P60953 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.62■□□□□ 0.09
CDC42P60953 TUBB8P12-201ENST00000308911 1335 ntBASIC15.62■□□□□ 0.09
CDC42P60953 TUBB7P-202ENST00000428444 1305 ntBASIC15.62■□□□□ 0.09
CDC42P60953 TUBB8P7-204ENST00000567960 1332 ntBASIC15.62■□□□□ 0.09
CDC42P60953 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CDC42P60953 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CDC42P60953 AC105917.1-201ENST00000506637 2539 ntBASIC15.61■□□□□ 0.09
CDC42P60953 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 AL391256.1-201ENST00000443260 1855 ntBASIC15.61■□□□□ 0.09
CDC42P60953 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CDC42P60953 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CDC42P60953 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC42P60953 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.61■□□□□ 0.09
CDC42P60953 HYMAI-201ENST00000635591 3347 ntBASIC15.61■□□□□ 0.09
CDC42P60953 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC42P60953 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.61■□□□□ 0.09
CDC42P60953 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.61■□□□□ 0.09
CDC42P60953 GPR32P1-201ENST00000601788 811 ntBASIC15.61■□□□□ 0.09
CDC42P60953 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.61■□□□□ 0.09
CDC42P60953 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 AC067930.6-201ENST00000623257 4947 ntBASIC15.61■□□□□ 0.09
CDC42P60953 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CDC42P60953 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms