Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S2P59780 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
AP3S2P59780 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S2P59780 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
AP3S2P59780 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.68□□□□□ -0.06
AP3S2P59780 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.67□□□□□ -0.06
AP3S2P59780 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.67□□□□□ -0.06
AP3S2P59780 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.67□□□□□ -0.06
AP3S2P59780 AL353719.1-201ENST00000566847 864 ntBASIC14.67□□□□□ -0.06
AP3S2P59780 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 AC092865.7-201ENST00000641832 219 ntBASIC14.67□□□□□ -0.06
AP3S2P59780 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP3S2P59780 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
AP3S2P59780 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.67□□□□□ -0.06
AP3S2P59780 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
AP3S2P59780 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
AP3S2P59780 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 TUBB8P12-201ENST00000308911 1335 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 TUBB7P-202ENST00000428444 1305 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 TUBB8P7-204ENST00000567960 1332 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.66□□□□□ -0.06
AP3S2P59780 SEC1P-202ENST00000473944 940 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 AC116562.2-201ENST00000507042 360 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 AC112698.1-201ENST00000510299 916 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.66□□□□□ -0.06
AP3S2P59780 AC009154.2-201ENST00000621177 724 ntBASIC14.66□□□□□ -0.06
AP3S2P59780 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
AP3S2P59780 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.66□□□□□ -0.06
AP3S2P59780 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.66□□□□□ -0.06
AP3S2P59780 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.66□□□□□ -0.06
AP3S2P59780 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
AP3S2P59780 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
AP3S2P59780 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
AP3S2P59780 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
AP3S2P59780 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
AP3S2P59780 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms