Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GPAT2P1-201ENST00000444924 1672 ntBASIC16.74■□□□□ 0.27
GTF2A1P52655 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
GTF2A1P52655 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 PHGDH-209ENST00000641074 1780 ntBASIC16.74■□□□□ 0.27
GTF2A1P52655 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GTF2A1P52655 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.74■□□□□ 0.27
GTF2A1P52655 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.73■□□□□ 0.27
GTF2A1P52655 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.73■□□□□ 0.27
GTF2A1P52655 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.73■□□□□ 0.27
GTF2A1P52655 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 AC118758.2-201ENST00000614242 2813 ntBASIC16.73■□□□□ 0.27
GTF2A1P52655 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.73■□□□□ 0.27
GTF2A1P52655 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
GTF2A1P52655 AC026271.2-201ENST00000428091 497 ntBASIC16.73■□□□□ 0.27
GTF2A1P52655 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.73■□□□□ 0.27
GTF2A1P52655 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 COL6A4P2-202ENST00000504443 2753 ntBASIC16.73■□□□□ 0.27
GTF2A1P52655 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GTF2A1P52655 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GTF2A1P52655 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC16.73■□□□□ 0.27
GTF2A1P52655 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.73■□□□□ 0.27
GTF2A1P52655 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GTF2A1P52655 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GTF2A1P52655 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
GTF2A1P52655 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
GTF2A1P52655 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.72■□□□□ 0.27
GTF2A1P52655 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
GTF2A1P52655 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GTF2A1P52655 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
GTF2A1P52655 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC16.72■□□□□ 0.27
GTF2A1P52655 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.71■□□□□ 0.27
GTF2A1P52655 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.71■□□□□ 0.27
GTF2A1P52655 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.71■□□□□ 0.27
GTF2A1P52655 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
GTF2A1P52655 PPT1-215ENST00000641471 2368 ntBASIC16.71■□□□□ 0.27
GTF2A1P52655 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.71■□□□□ 0.27
GTF2A1P52655 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.71■□□□□ 0.27
GTF2A1P52655 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GTF2A1P52655 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.71■□□□□ 0.27
GTF2A1P52655 MIPEPP3-201ENST00000412105 444 ntBASIC16.71■□□□□ 0.27
GTF2A1P52655 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms