Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
BRCA2P51587 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRCA2P51587 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 AC073439.1-201ENST00000624121 1774 ntBASIC18.78■□□□□ 0.6
BRCA2P51587 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
BRCA2P51587 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 AC105233.2-201ENST00000523697 349 ntBASIC18.78■□□□□ 0.6
BRCA2P51587 AF228730.5-201ENST00000530288 346 ntBASIC18.78■□□□□ 0.6
BRCA2P51587 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCA2P51587 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCA2P51587 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCA2P51587 USP32P1-208ENST00000506594 1164 ntBASIC18.78■□□□□ 0.6
BRCA2P51587 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCA2P51587 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.78■□□□□ 0.6
BRCA2P51587 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.78■□□□□ 0.6
BRCA2P51587 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.78■□□□□ 0.6
BRCA2P51587 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
BRCA2P51587 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 LYSMD4-203ENST00000378904 2122 ntBASIC18.77■□□□□ 0.6
BRCA2P51587 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BRCA2P51587 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.77■□□□□ 0.6
BRCA2P51587 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 RNU1-129P-201ENST00000384064 167 ntBASIC18.77■□□□□ 0.6
BRCA2P51587 KRT223P-202ENST00000449164 1292 ntBASIC18.77■□□□□ 0.6
BRCA2P51587 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.77■□□□□ 0.6
BRCA2P51587 U1.21-201ENST00000580816 167 ntBASIC18.77■□□□□ 0.6
BRCA2P51587 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRCA2P51587 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.77■□□□□ 0.6
BRCA2P51587 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.77■□□□□ 0.59
BRCA2P51587 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
BRCA2P51587 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRCA2P51587 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
BRCA2P51587 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.77■□□□□ 0.59
BRCA2P51587 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.77■□□□□ 0.59
BRCA2P51587 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.77■□□□□ 0.59
BRCA2P51587 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCA2P51587 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCA2P51587 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 AC011495.1-201ENST00000498085 584 ntBASIC18.76■□□□□ 0.59
BRCA2P51587 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCA2P51587 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.76■□□□□ 0.59
BRCA2P51587 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCA2P51587 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCA2P51587 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BRCA2P51587 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.76■□□□□ 0.59
BRCA2P51587 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.76■□□□□ 0.59
BRCA2P51587 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRCA2P51587 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms