Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.41■□□□□ 0.22
SLC6A12P48065 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SLC6A12P48065 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A12P48065 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.41■□□□□ 0.22
SLC6A12P48065 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SLC6A12P48065 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC6A12P48065 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A12P48065 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A12P48065 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 KRT126P-201ENST00000549467 1181 ntBASIC16.4■□□□□ 0.22
SLC6A12P48065 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC6A12P48065 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A12P48065 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.4■□□□□ 0.22
SLC6A12P48065 AC105339.3-201ENST00000560043 636 ntBASIC16.4■□□□□ 0.22
SLC6A12P48065 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC6A12P48065 AL356488.2-201ENST00000602755 427 ntBASIC16.4■□□□□ 0.22
SLC6A12P48065 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A12P48065 AC008667.4-201ENST00000607370 168 ntBASIC16.4■□□□□ 0.22
SLC6A12P48065 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SLC6A12P48065 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC6A12P48065 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 AP002414.3-201ENST00000589352 1468 ntBASIC16.4■□□□□ 0.22
SLC6A12P48065 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.4■□□□□ 0.22
SLC6A12P48065 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC6A12P48065 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SLC6A12P48065 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.39■□□□□ 0.22
SLC6A12P48065 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SLC6A12P48065 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC6A12P48065 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 HLA-J-202ENST00000469281 1241 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC6A12P48065 IGHV3-65-201ENST00000523210 341 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 AC107918.2-201ENST00000530817 355 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 AP002469.2-201ENST00000531724 424 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 MPDU1-223ENST00000582151 728 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 GGTLC5P-201ENST00000617623 998 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 FAM215A-202ENST00000632077 792 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 AL139011.1-202ENST00000642063 584 ntBASIC16.39■□□□□ 0.21
SLC6A12P48065 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC6A12P48065 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC6A12P48065 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC6A12P48065 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC6A12P48065 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC6A12P48065 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC6A12P48065 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC6A12P48065 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC6A12P48065 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC6A12P48065 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms