Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.07□□□□□ -0.16
SNCAP37840 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.07□□□□□ -0.16
SNCAP37840 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 AL662844.4-201ENST00000606367 2838 ntBASIC14.07□□□□□ -0.16
SNCAP37840 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 AC092171.3-201ENST00000610122 2651 ntBASIC14.07□□□□□ -0.16
SNCAP37840 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.07□□□□□ -0.16
SNCAP37840 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.07□□□□□ -0.16
SNCAP37840 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.07□□□□□ -0.16
SNCAP37840 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
SNCAP37840 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SNCAP37840 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SNCAP37840 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.07□□□□□ -0.16
SNCAP37840 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.07□□□□□ -0.16
SNCAP37840 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.07□□□□□ -0.16
SNCAP37840 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.07□□□□□ -0.16
SNCAP37840 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 AC016396.2-201ENST00000562575 1417 ntBASIC14.07□□□□□ -0.16
SNCAP37840 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNCAP37840 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.07□□□□□ -0.16
SNCAP37840 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AC099063.4-201ENST00000641099 1602 ntBASIC14.06□□□□□ -0.16
SNCAP37840 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.06□□□□□ -0.16
SNCAP37840 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AC112698.1-201ENST00000510299 916 ntBASIC14.06□□□□□ -0.16
SNCAP37840 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.06□□□□□ -0.16
SNCAP37840 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.06□□□□□ -0.16
SNCAP37840 AL023973.1-201ENST00000624619 620 ntBASIC14.06□□□□□ -0.16
SNCAP37840 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SNCAP37840 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 KRT8P47-201ENST00000604727 1398 ntBASIC14.06□□□□□ -0.16
SNCAP37840 NORAD-201ENST00000565493 5339 ntBASIC14.06□□□□□ -0.16
SNCAP37840 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.06□□□□□ -0.16
SNCAP37840 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.06□□□□□ -0.16
SNCAP37840 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNCAP37840 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SNCAP37840 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.05□□□□□ -0.16
SNCAP37840 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms