Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 AC026691.1-201ENST00000602502 2017 ntBASIC18.67■□□□□ 0.58
KRT9P35527 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KRT9P35527 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT9P35527 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT9P35527 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
KRT9P35527 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT9P35527 UPK3BP1-201ENST00000428678 509 ntBASIC18.66■□□□□ 0.58
KRT9P35527 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT9P35527 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 AC096582.2-201ENST00000510860 516 ntBASIC18.66■□□□□ 0.58
KRT9P35527 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.66■□□□□ 0.58
KRT9P35527 AC012615.1-201ENST00000565797 1299 ntBASIC18.66■□□□□ 0.58
KRT9P35527 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT9P35527 AC009336.1-201ENST00000608941 1553 ntBASIC18.66■□□□□ 0.58
KRT9P35527 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KRT9P35527 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT9P35527 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
KRT9P35527 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 GPR89P-201ENST00000407924 1495 ntBASIC18.65■□□□□ 0.58
KRT9P35527 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 STK19B-204ENST00000512515 211 ntBASIC18.65■□□□□ 0.58
KRT9P35527 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.65■□□□□ 0.58
KRT9P35527 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KRT9P35527 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KRT9P35527 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.65■□□□□ 0.58
KRT9P35527 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KRT9P35527 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.58
KRT9P35527 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KRT9P35527 AL391005.1-201ENST00000623953 2435 ntBASIC18.64■□□□□ 0.58
KRT9P35527 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT9P35527 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT9P35527 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
KRT9P35527 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT9P35527 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT9P35527 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT9P35527 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms