Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN1P35523 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN1P35523 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN1P35523 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.41■□□□□ 0.7
CLCN1P35523 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 AC117947.1-201ENST00000427448 529 ntBASIC19.41■□□□□ 0.7
CLCN1P35523 BX664615.1-201ENST00000443558 458 ntBASIC19.41■□□□□ 0.7
CLCN1P35523 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 YBX1P2-201ENST00000489612 999 ntBASIC19.41■□□□□ 0.7
CLCN1P35523 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLCN1P35523 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLCN1P35523 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN1P35523 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.41■□□□□ 0.7
CLCN1P35523 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CLCN1P35523 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN1P35523 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN1P35523 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 LINC02012-201ENST00000608206 1725 ntBASIC19.4■□□□□ 0.7
CLCN1P35523 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN1P35523 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN1P35523 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 LINC01023-201ENST00000606054 436 ntBASIC19.4■□□□□ 0.7
CLCN1P35523 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN1P35523 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN1P35523 MTHFR-217ENST00000641820 1569 ntBASIC19.4■□□□□ 0.7
CLCN1P35523 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN1P35523 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN1P35523 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CLCN1P35523 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.39■□□□□ 0.7
CLCN1P35523 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN1P35523 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN1P35523 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 SPDYE15P-201ENST00000424157 909 ntBASIC19.39■□□□□ 0.69
CLCN1P35523 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 KRT18P57-201ENST00000443599 1254 ntBASIC19.39■□□□□ 0.69
CLCN1P35523 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 AC034232.1-201ENST00000506026 1064 ntBASIC19.39■□□□□ 0.69
CLCN1P35523 DUTP2-201ENST00000519164 463 ntBASIC19.39■□□□□ 0.69
CLCN1P35523 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.39■□□□□ 0.69
CLCN1P35523 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
CLCN1P35523 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CLCN1P35523 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.39■□□□□ 0.69
CLCN1P35523 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC19.39■□□□□ 0.69
CLCN1P35523 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CLCN1P35523 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CLCN1P35523 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CLCN1P35523 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms