Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 GNAS-203ENST00000306120 1878 ntBASIC19.35■□□□□ 0.69
CNGA1P29973 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 AL355312.1-201ENST00000407115 2176 ntBASIC19.35■□□□□ 0.69
CNGA1P29973 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.35■□□□□ 0.69
CNGA1P29973 TERF1P3-201ENST00000505638 1227 ntBASIC19.35■□□□□ 0.69
CNGA1P29973 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.35■□□□□ 0.69
CNGA1P29973 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.35■□□□□ 0.69
CNGA1P29973 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNGA1P29973 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNGA1P29973 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
CNGA1P29973 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CNGA1P29973 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CNGA1P29973 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 FAM58DP-201ENST00000428076 619 ntBASIC19.34■□□□□ 0.69
CNGA1P29973 TSPY16P-201ENST00000449843 468 ntBASIC19.34■□□□□ 0.69
CNGA1P29973 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.34■□□□□ 0.69
CNGA1P29973 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.34■□□□□ 0.69
CNGA1P29973 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.34■□□□□ 0.69
CNGA1P29973 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.34■□□□□ 0.69
CNGA1P29973 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.34■□□□□ 0.69
CNGA1P29973 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CNGA1P29973 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CNGA1P29973 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNGA1P29973 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.33■□□□□ 0.69
CNGA1P29973 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CNGA1P29973 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.33■□□□□ 0.69
CNGA1P29973 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.33■□□□□ 0.69
CNGA1P29973 AC063926.2-201ENST00000623766 1308 ntBASIC19.33■□□□□ 0.69
CNGA1P29973 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CNGA1P29973 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.33■□□□□ 0.69
CNGA1P29973 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CNGA1P29973 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.33■□□□□ 0.68
CNGA1P29973 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 KLF2P3-201ENST00000451977 1087 ntBASIC19.33■□□□□ 0.68
CNGA1P29973 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 RN7SL589P-201ENST00000481268 310 ntBASIC19.33■□□□□ 0.68
CNGA1P29973 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.33■□□□□ 0.68
CNGA1P29973 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.33■□□□□ 0.68
CNGA1P29973 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNGA1P29973 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms