Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTPN3P26045 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.36■□□□□ 0.37
PTPN3P26045 KRT18P27-201ENST00000427733 1299 ntBASIC17.36■□□□□ 0.37
PTPN3P26045 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 OR7E14P-202ENST00000530490 1290 ntBASIC17.36■□□□□ 0.37
PTPN3P26045 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.36■□□□□ 0.37
PTPN3P26045 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 RN7SL510P-201ENST00000581311 263 ntBASIC17.36■□□□□ 0.37
PTPN3P26045 AC006557.2-201ENST00000592985 1240 ntBASIC17.36■□□□□ 0.37
PTPN3P26045 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
PTPN3P26045 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN3P26045 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTPN3P26045 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.36■□□□□ 0.37
PTPN3P26045 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 AL021920.2-201ENST00000624828 1351 ntBASIC17.36■□□□□ 0.37
PTPN3P26045 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTPN3P26045 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.36■□□□□ 0.37
PTPN3P26045 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
PTPN3P26045 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.35■□□□□ 0.37
PTPN3P26045 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PTPN3P26045 AL450487.1-201ENST00000426799 995 ntBASIC17.35■□□□□ 0.37
PTPN3P26045 AC079781.3-201ENST00000449110 356 ntBASIC17.35■□□□□ 0.37
PTPN3P26045 FAM197Y8-203ENST00000450145 560 ntBASIC17.35■□□□□ 0.37
PTPN3P26045 AC018712.1-201ENST00000455767 687 ntBASIC17.35■□□□□ 0.37
PTPN3P26045 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.35■□□□□ 0.37
PTPN3P26045 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 AL805961.1-202ENST00000641562 540 ntBASIC17.35■□□□□ 0.37
PTPN3P26045 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.35■□□□□ 0.37
PTPN3P26045 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTPN3P26045 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN3P26045 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN3P26045 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.34■□□□□ 0.37
PTPN3P26045 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN3P26045 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PTPN3P26045 AC073621.1-201ENST00000392730 636 ntBASIC17.34■□□□□ 0.37
PTPN3P26045 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTPN3P26045 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTPN3P26045 HNRNPDP1-201ENST00000439535 754 ntBASIC17.34■□□□□ 0.37
PTPN3P26045 PCDHA14-201ENST00000506751 2298 ntBASIC17.34■□□□□ 0.37
PTPN3P26045 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.34■□□□□ 0.37
PTPN3P26045 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms