Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP8P22894 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
MMP8P22894 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MMP8P22894 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP8P22894 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP8P22894 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MMP8P22894 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.89■□□□□ 0.45
MMP8P22894 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MMP8P22894 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 AC124067.4-201ENST00000519691 2379 ntBASIC17.88■□□□□ 0.45
MMP8P22894 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MMP8P22894 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
MMP8P22894 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.88■□□□□ 0.45
MMP8P22894 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 AL356488.2-201ENST00000602755 427 ntBASIC17.88■□□□□ 0.45
MMP8P22894 AC008667.4-201ENST00000607370 168 ntBASIC17.88■□□□□ 0.45
MMP8P22894 FAM215A-202ENST00000632077 792 ntBASIC17.88■□□□□ 0.45
MMP8P22894 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.88■□□□□ 0.45
MMP8P22894 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.88■□□□□ 0.45
MMP8P22894 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.88■□□□□ 0.45
MMP8P22894 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 HLA-A-202ENST00000376806 1854 ntBASIC17.88■□□□□ 0.45
MMP8P22894 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MMP8P22894 AP002414.3-201ENST00000589352 1468 ntBASIC17.88■□□□□ 0.45
MMP8P22894 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 AC006277.1-201ENST00000624348 1610 ntBASIC17.87■□□□□ 0.45
MMP8P22894 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 RPS2P28-201ENST00000314255 741 ntBASIC17.87■□□□□ 0.45
MMP8P22894 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.87■□□□□ 0.45
MMP8P22894 IGHV3-65-201ENST00000523210 341 ntBASIC17.87■□□□□ 0.45
MMP8P22894 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
MMP8P22894 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.87■□□□□ 0.45
MMP8P22894 AL160237.2-201ENST00000556165 472 ntBASIC17.87■□□□□ 0.45
MMP8P22894 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.87■□□□□ 0.45
MMP8P22894 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 GGTLC5P-201ENST00000617623 998 ntBASIC17.87■□□□□ 0.45
MMP8P22894 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
MMP8P22894 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.87■□□□□ 0.45
MMP8P22894 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MMP8P22894 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MMP8P22894 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP8P22894 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP8P22894 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.86■□□□□ 0.45
MMP8P22894 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.86■□□□□ 0.45
MMP8P22894 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.86■□□□□ 0.45
MMP8P22894 MIR1199-201ENST00000621445 119 ntBASIC17.86■□□□□ 0.45
MMP8P22894 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.86■□□□□ 0.45
MMP8P22894 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.86■□□□□ 0.45
MMP8P22894 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms