Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 ME2P1-201ENST00000426028 1970 ntBASIC14.64□□□□□ -0.07
CCL1P22362 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.64□□□□□ -0.07
CCL1P22362 PAWRP1-201ENST00000451083 565 ntBASIC14.64□□□□□ -0.07
CCL1P22362 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
CCL1P22362 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CCL1P22362 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.64□□□□□ -0.07
CCL1P22362 NKAPP1-205ENST00000585790 367 ntBASIC14.64□□□□□ -0.07
CCL1P22362 AC064862.7-201ENST00000604520 867 ntBASIC14.64□□□□□ -0.07
CCL1P22362 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.64□□□□□ -0.07
CCL1P22362 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.64□□□□□ -0.07
CCL1P22362 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL1P22362 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.64□□□□□ -0.07
CCL1P22362 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CCL1P22362 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 AL356309.3-201ENST00000624132 1934 ntBASIC14.63□□□□□ -0.07
CCL1P22362 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.63□□□□□ -0.07
CCL1P22362 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.63□□□□□ -0.07
CCL1P22362 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.63□□□□□ -0.07
CCL1P22362 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.63□□□□□ -0.07
CCL1P22362 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.63□□□□□ -0.07
CCL1P22362 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.63□□□□□ -0.07
CCL1P22362 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 MTHFR-217ENST00000641820 1569 ntBASIC14.63□□□□□ -0.07
CCL1P22362 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 AL513523.2-202ENST00000427283 2040 ntBASIC14.63□□□□□ -0.07
CCL1P22362 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CCL1P22362 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CCL1P22362 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.62□□□□□ -0.07
CCL1P22362 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.62□□□□□ -0.07
CCL1P22362 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.62□□□□□ -0.07
CCL1P22362 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.62□□□□□ -0.07
CCL1P22362 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.62□□□□□ -0.07
CCL1P22362 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CCL1P22362 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms