Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NCLP19338 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLP19338 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLP19338 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLP19338 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 AC112698.1-201ENST00000510299 916 ntBASIC20.34■□□□□ 0.85
NCLP19338 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.34■□□□□ 0.85
NCLP19338 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLP19338 AC009154.2-201ENST00000621177 724 ntBASIC20.34■□□□□ 0.85
NCLP19338 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 AC092171.3-201ENST00000610122 2651 ntBASIC20.34■□□□□ 0.85
NCLP19338 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.34■□□□□ 0.85
NCLP19338 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCLP19338 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.34■□□□□ 0.85
NCLP19338 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.33■□□□□ 0.85
NCLP19338 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.33■□□□□ 0.85
NCLP19338 AL662844.4-201ENST00000606367 2838 ntBASIC20.33■□□□□ 0.85
NCLP19338 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NCLP19338 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
NCLP19338 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.33■□□□□ 0.85
NCLP19338 KRT18P48-201ENST00000434763 852 ntBASIC20.33■□□□□ 0.85
NCLP19338 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 AC092597.1-201ENST00000487352 616 ntBASIC20.33■□□□□ 0.85
NCLP19338 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCLP19338 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.33■□□□□ 0.85
NCLP19338 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.33■□□□□ 0.85
NCLP19338 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC20.33■□□□□ 0.84
NCLP19338 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.33■□□□□ 0.84
NCLP19338 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
NCLP19338 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NCLP19338 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCLP19338 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCLP19338 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NCLP19338 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCLP19338 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NCLP19338 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NCLP19338 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NCLP19338 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.32■□□□□ 0.84
NCLP19338 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 AC116353.5-201ENST00000638148 1699 ntBASIC20.32■□□□□ 0.84
NCLP19338 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NCLP19338 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCLP19338 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCLP19338 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms