Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
CCL3L1P16619 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCL3L1P16619 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL3L1P16619 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 TERC-201ENST00000602385 541 ntBASIC14.06□□□□□ -0.16
CCL3L1P16619 AC008667.4-201ENST00000607370 168 ntBASIC14.06□□□□□ -0.16
CCL3L1P16619 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL3L1P16619 PGM5P2-202ENST00000637225 1043 ntBASIC14.06□□□□□ -0.16
CCL3L1P16619 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL3L1P16619 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL3L1P16619 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL3L1P16619 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL3L1P16619 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CCL3L1P16619 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 PAWRP1-201ENST00000451083 565 ntBASIC14.05□□□□□ -0.16
CCL3L1P16619 AC087163.2-201ENST00000457299 853 ntBASIC14.05□□□□□ -0.16
CCL3L1P16619 IGHV3-65-201ENST00000523210 341 ntBASIC14.05□□□□□ -0.16
CCL3L1P16619 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL3L1P16619 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
CCL3L1P16619 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL3L1P16619 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL3L1P16619 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 AC005915.1-201ENST00000624912 2018 ntBASIC14.05□□□□□ -0.16
CCL3L1P16619 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL3L1P16619 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 PCDHA12-202ENST00000613593 2588 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 AL590627.1-203ENST00000421194 1026 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 AC108073.2-201ENST00000464002 357 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 AC108751.1-201ENST00000490852 363 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 RNA5SP415-201ENST00000517246 115 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 IGHV3-22-201ENST00000520721 359 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 UNC93B6-202ENST00000528242 690 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL3L1P16619 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 AC120114.3-201ENST00000611923 658 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCL3L1P16619 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL3L1P16619 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 IL9RP2-201ENST00000423948 1312 ntBASIC14.04□□□□□ -0.16
CCL3L1P16619 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL3L1P16619 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL3L1P16619 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms