Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.89■□□□□ 0.45
RARAP10276 PRYP5-201ENST00000451909 266 ntBASIC17.89■□□□□ 0.45
RARAP10276 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.89■□□□□ 0.45
RARAP10276 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 AC091304.2-201ENST00000564639 760 ntBASIC17.89■□□□□ 0.45
RARAP10276 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.89■□□□□ 0.45
RARAP10276 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
RARAP10276 NKAPP1-205ENST00000585790 367 ntBASIC17.89■□□□□ 0.45
RARAP10276 MTDHP3-201ENST00000594186 672 ntBASIC17.89■□□□□ 0.45
RARAP10276 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.89■□□□□ 0.45
RARAP10276 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RARAP10276 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.89■□□□□ 0.45
RARAP10276 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.88■□□□□ 0.45
RARAP10276 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
RARAP10276 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RARAP10276 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.88■□□□□ 0.45
RARAP10276 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.88■□□□□ 0.45
RARAP10276 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
RARAP10276 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 AC012313.10-201ENST00000623509 926 ntBASIC17.88■□□□□ 0.45
RARAP10276 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RARAP10276 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
RARAP10276 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RARAP10276 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.88■□□□□ 0.45
RARAP10276 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.87■□□□□ 0.45
RARAP10276 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RARAP10276 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 PCDHB17P-201ENST00000539533 2393 ntBASIC17.87■□□□□ 0.45
RARAP10276 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 AC006449.5-201ENST00000610658 2098 ntBASIC17.87■□□□□ 0.45
RARAP10276 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RARAP10276 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RARAP10276 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.87■□□□□ 0.45
RARAP10276 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.86■□□□□ 0.45
RARAP10276 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 AL356309.3-201ENST00000624132 1934 ntBASIC17.86■□□□□ 0.45
RARAP10276 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RARAP10276 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.86■□□□□ 0.45
RARAP10276 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RARAP10276 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.86■□□□□ 0.45
RARAP10276 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.86■□□□□ 0.45
RARAP10276 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms